| Property |
Value |
| Working Groups |
RG Oudelaar |
| Subproject |
P02 |
| Open Access |
Yes |
| Publication Type |
Journal Article |
| Peer Reviewed |
Yes |
| PMID |
38291333 |
| DOI |
10.1038/s41588-023-01649-8 |
| Publication Year |
2024 |
| Title |
In vitro reconstitution of chromatin domains shows a role for nucleosome positioning in 3D genome organization |
| Journal |
Nature Genetics |
| ISSN |
1061-4036 |
| eISSN |
1546-1718 |
| URL |
https://www.nature.com/articles/s41588-023-01649-8 |
| Journal Abbreviation |
Nat Genet |
| Authors |
Oberbeckmann E, Quililan K, Cramer P, Oudelaar AM |
| First Author |
Oberbeckmann E |
| Last Author |
Oudelaar AM |
External Resources
nature.c...-8.pdfhttps://www.nature.com/articles/s41588-023-01649-8.pdf Article fulltext
gro-2/140364http://resolver.sub.uni-goettingen.de/purl?gro-2/140364 GRO.publications identifier
GSE220647https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE220647 NCBI GEO Dataset (GSE220647)
GSM2262329https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2262329 NCBI GEO Dataset (GSM2262329)
GSM2262330https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2262330 NCBI GEO Dataset (GSM2262330)
GSM2262331https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2262331 NCBI GEO Dataset (GSM2262331)
GSM2916410https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2916410 NCBI GEO Dataset (GSM2916410)
GSM2916412https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2916412 NCBI GEO Dataset (GSM2916412)
GSM4449154https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM4449154 NCBI GEO Dataset (GSM4449154)
GSM4449823https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM4449823 NCBI GEO Dataset (GSM4449823)
7111https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=7111 NCBI taxonomy (cabbage looper, Trichoplusia ni)
4932https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=4932 NCBI taxonomy (yeast, Saccharomyces cerevisiae)
0000-0001-9123-5689https://orcid.org/0000-0001-9123-5689 ORCID identifier (Elisa Oberbeckmann)
0000-0001-5454-7755https://orcid.org/0000-0001-5454-7755 ORCID identifier (Patrick Cramer)
0000-0002-3425-0476https://orcid.org/0000-0002-3425-0476 ORCID identifier (A. Marieke Oudelaar)
663https://prod.mbexc.uni-goettingen.de/literature/publications/663 Published Data Registry entry (MBExC, preprint)
4/11https://rdp.sfb1565.uni-goettingen.de/archive/4/11 Research Data Archive (supplemental material)
03av75f26https://ror.org/03av75f26 ROR identifier (03av75f26, Max Planck Institute for Multidisciplinary Sciences)
SCR_011919https://scicrunch.org/resolver/SCR_011919 SciCrunch identifier (RRID:SCR_011919, BLAT)
SCR_005476https://scicrunch.org/resolver/SCR_005476 SciCrunch identifier (RRID:SCR_005476, Bowtie)
SCR_016368https://scicrunch.org/resolver/SCR_016368 SciCrunch identifier (RRID:SCR_016368, Bowtie 2)
SCR_005531https://scicrunch.org/resolver/SCR_005531 SciCrunch identifier (RRID:SCR_005531, FLASH)
SCR_016381https://scicrunch.org/resolver/SCR_016381 SciCrunch identifier (RRID:SCR_016381, Illumina NextSeq 550 System)
SCR_011793https://scicrunch.org/resolver/SCR_011793 SciCrunch identifier (RRID:SCR_011793, Integrative Genomics Viewer)
SCR_013291https://scicrunch.org/resolver/SCR_013291 SciCrunch identifier (RRID:SCR_013291, MACS)
SCR_001783https://scicrunch.org/resolver/SCR_001783 SciCrunch identifier (RRID:SCR_001783, MEME Suite)
SCR_001905https://scicrunch.org/resolver/SCR_001905 SciCrunch identifier (RRID:SCR_001905, R Project for Statistical Computing)
SCR_000432https://scicrunch.org/resolver/SCR_000432 SciCrunch identifier (RRID:SCR_000432, RStudio)
SCR_011847https://scicrunch.org/resolver/SCR_011847 SciCrunch identifier (RRID:SCR_011847, Trim Galore)
static-c...SM.pdfhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41588-023-01649-8/MediaObjects/41588_2023_1649_MOESM1_ESM.pdf Supplemental material
github.c...ture-Chttps://github.com/jojdavies/Micro-Capture-C Supplemental material (code, reused)
process....emic/1https://process.innovation.ox.ac.uk/software/p/16529a/micro-capture-c-academic/1 Supplemental material (code, reused)
10.5281/zenodo.10361971https://doi.org/10.5281/zenodo.10361971 Supplemental material (code, reused)
10.5281/zenodo.10373300https://doi.org/10.5281/zenodo.10373300 Supplemental material (code, reused)
goeseek.gwdguser.de/studies/143https://goeseek.gwdguser.de/studies/143 Supplemental material (goeseek study)
static-c...SM.pdfhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41588-023-01649-8/MediaObjects/41588_2023_1649_MOESM3_ESM.pdf Supplemental material (peer review)
static-c...SM.pdfhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41588-023-01649-8/MediaObjects/41588_2023_1649_MOESM2_ESM.pdf Supplemental material (reporting summary)
static-c...M.xlsxhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41588-023-01649-8/MediaObjects/41588_2023_1649_MOESM5_ESM.xlsx Supplemental material (source data)
static-c...M.xlsxhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41588-023-01649-8/MediaObjects/41588_2023_1649_MOESM6_ESM.xlsx Supplemental material (source data)
static-c...SM.pdfhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41588-023-01649-8/MediaObjects/41588_2023_1649_MOESM7_ESM.pdf Supplemental material (source data)
static-c...SM.pdfhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41588-023-01649-8/MediaObjects/41588_2023_1649_MOESM8_ESM.pdf Supplemental material (source data)
static-c...SM.pdfhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41588-023-01649-8/MediaObjects/41588_2023_1649_MOESM9_ESM.pdf Supplemental material (source data)
static-c...M.xlsxhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41588-023-01649-8/MediaObjects/41588_2023_1649_MOESM4_ESM.xlsx Supplemental material (table)
Q129124712https://www.wikidata.org/wiki/Q129124712 Wikidata ID
Linked Antibodies
| PID |
AG |
Type |
Antigen symbol |
Antibody Registry ID |
Name |
| primary-0013 |
|
primary |
|
AB_10063035 |
ANTI-FLAG® M2 Affinity Gel |